FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences771995
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATAGGTGGTCAGGTCTGTGACCAGGCAGGTCAACTTGGTGGACTTGG27620.35777433791669633No Hit
TGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGG20690.26800691714324576No Hit
GTAATATACGGCCGTGTCTTCGGCTCTCAGGCTGTTCATTTGCAGATACA18820.24378396233136224No Hit
GTGCAGGGCCACCCCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGG17370.22500145726332424No Hit
ACCTATGACAGCGTGACCATCTCCTGGACCCGCCAGAATGGCGAAGCTGT14530.18821365423351188No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT14110.18277320448966639No Hit
GCCCTGCACAGGCCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCT13570.1757783405332936No Hit
CCTCATATATGGTGCATCCAGCAGGGCCACGGGCATCCCAGACAGGTTCA13080.16943114916547386No Hit
CCTATGACAGCGTGACCATCTCCTGGACCCGCCAGAATGGCGAAGCTGTG12650.16386116490391778No Hit
GGTGTAGGTCTCCCCCGTGTTCCATTCCTCTTCGGACACGGTCAGGATGC12600.16321349231536475No Hit
TCTCAGGACTGATGGGAAGCCCCGGGTGCTGCTGATGTCAGAGTTGTTCT12530.1623067506913905No Hit
CTCCTGGACCCGCCAGAATGGCGAAGCTGTGAAAACCCACACCAACATCT11540.1494828334380404No Hit
TATATGAGGAGCCTGGGAGCCTGGCCAGGCTTCTGCTGGTACCAGGCTAA10650.1379542613617964No Hit
GTCCCCAGGCACCCTGTCTGTGTCTCCAGGGGAGAGAGCCACCCTCTCCT10310.13355008775963575No Hit
GTATATTACTGCGCAAGAAGGGTCCCGTACAGCAGCTCGTCCGCCTATTT10230.1325138116179509No Hit
ATATACGGCCGTGTCTTCGGCTCTCAGGCTGTTCATTTGCAGATACAGCG10160.13160706999397664No Hit
GTCCTGAGAGGGGGCAAGTACGCAGCCACCTCACAGGTGCTGCTGCCTTC10050.13018219029915998No Hit
GTTAGGACCCAGCGGGAACCATGGCAACCCCAGCGCAGCTTCTCTTCCTC9380.1215033776125493No Hit
GTCCAGGAGATGGTCACGCTGTCATAGGTGGTCAGGTCTGTGACCAGGCA9030.11696966949267806No Hit
CTCCATGTGTGTCCCCGATCAAGACACAGCCATCCGGGTCTTCGCCATCC8870.11489711720930834No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC8500.11010434005401588No Hit
CATATATGGTGCATCCAGCAGGGCCACGGGCATCCCAGACAGGTTCAGTG8240.10673644259354012No Hit
GTATGTGACCAGCGCCCCAATGCCTGAGCCCCAGGCCCCAGGCCGGTACT8180.10595923548727647No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)