FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences939690
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATATACGGCCGTGTCCGCGGCGGTCACAGAGCTCACCTTCAGGGAGA19290.20528046483414744No Hit
TCCTAAGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC18540.19729910928072023No Hit
GACTTAGGACGGTCAGCTTGGTCCCTCCGCCGAATATCACATGATTCCCA16170.1720780257318903No Hit
GTCATAGGTGGTCAGGTCTGTGACCAGGCAGGTCAACTTGGTGGACTTGG15620.16622503165937702No Hit
CTATTATACAAGTTGGTACCAGCAGAAGCCAGGACAGGCCCCTGTACTTG13560.14430290840596366No Hit
TGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGG13200.14047185774031862No Hit
GTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCG12510.1331290106311656No Hit
ACTCAGGACCCTGCTGTGTCTGTGGCCTTGGGACAGACAGTCAGCATCAC12260.1304685587800232No Hit
CCCCTGTACTTGTCATCTATGGTAACAACAACCGGCCCTCAGGGATCCCA11950.12716959848460663No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT11370.12099735018995625No Hit
GTAATAGTCAGCCTCATCTTCCGCCTGAGCCCCAGTGATGGTCAAGGAAG11050.11759197182049398No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA10760.11450584767316882No Hit
GTGCAGGGCCACCCCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGG10180.10833359937851846No Hit
GTTCTGGGGTGTCTCCACCATGGCCTGGACCCCTCTCTGGCTCACTCTCC9910.10546031137928466No Hit
GTATATTACTGTGCGAGAAGTAAATGGGACTATGGCTACGGTATGGACGT9830.1046089667869191No Hit
GTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGT9660.10279985952814227No Hit
GTACAGGGGCCTGTCCTGGCTTCTGCTGGTACCAACTTGTATAATAGCTT9660.10279985952814227No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT9640.10258702338005087No Hit
GCCTTGGGCTGACTTAGGACGGTCAGCTTGGTCCCTCCGCCGAATATCAC9420.10024582575104556No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)