EGAF00005280091 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280091
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	526128
Sequences flagged as poor quality	0
Sequence length	150
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTTGATACCACTGCTTGATACCACTGCTTGATACCACTGCTTGATACCA	1301	0.24727822887206152	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	1179	0.2240899552960496	No Hit
GTATCAAGCAGTGGTATCAAGCAGTGGTATCAAGCAGTGGTATCAAGCAG	1171	0.22256941276647507	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1021	0.19405924033695224	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1001	0.19025788401301585	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	696	0.13228720007298606	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	685	0.13019645409482103	No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT	645	0.12259374144694826	No Hit
GAGTTACAGTACCCCTCCTACGTTCGGCCAAGGGACCAAGGTGGAAATCA	635	0.12069306328498007	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	628	0.11936258857160235	No Hit
ATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCG	628	0.11936258857160235	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	626	0.11898245293920871	No Hit
GTAATACACAGCCGTGTCCTCGGCTCTCAGACTGTTCATTTGCAGATACA	608	0.11556123224766596	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	595	0.11309035063710733	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGG	583	0.11080953684274548	No Hit
GTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAG	565	0.10738831615120276	No Hit
GTGTATTACTGTGCCTCAGAGGGGCGGGAATACTATGGTTCAGGGAGTTA	528	0.10035580695192045	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACCGTT	40	0.0062218513	53.989773	7
ATACGCC	70	0.0010927574	41.142883	6
ATCAACG	2230	0.0	38.1023	3
TCAACGC	2250	0.0	37.76002	4
CAACGCA	2295	0.0	37.019634	5
TATCAAC	2335	0.0	36.697304	2
AACGCAG	2380	0.0	36.302544	6
CAGCGCT	200	2.419256E-10	35.993183	9
GAATACG	205	3.1468517E-10	35.115295	9
TACACGG	350	0.0	34.97145	6
CGCAGAG	2480	0.0	34.832108	8
GTACTAG	85	0.0028221898	33.91461	1
GTGCTAG	280	0.0	33.4604	1
GTACACG	375	0.0	32.640022	5
GCAGAGT	2750	0.0	30.888693	9
ACGCAGA	2820	0.0	30.632494	7
ACACGGG	445	0.0	29.118078	7
TACTAGG	130	6.742561E-4	27.69496	2
CCCCGAT	105	0.007969785	27.428589	6
TATGTAC	490	0.0	26.451511	2