EGAF00005280099 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280099
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1268843
Sequences flagged as poor quality	0
Sequence length	150
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	3236	0.2550354929648507	No Hit
ACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGA	2998	0.23627824719055077	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	2413	0.19017325232514976	No Hit
GTAGTAGACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGAAGCA	2299	0.1811886892231742	No Hit
GTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGCCACCCTCTCCT	2252	0.17748452724253513	No Hit
GTTAGGACCCAGAGGGAACCATGGAAGCCCCAGCTCAGCTTCTCTTCCTC	2052	0.16172213583556044	No Hit
GTATATGGTATTACTACTACCACTAATGTATGAAACCCACTCCAGCCCCT	1913	0.15076727380771301	No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT	1864	0.1469054879130042	No Hit
GTCTTGACACAGTCTCCAGCCACCCTGTCTTTGTCTCCAGGGGAAAGAGC	1757	0.13847260851027274	No Hit
TACTTAGCCTGGTACCAACACAAGCCTGGCCAGGCTCCCAGGCTCCTCAT	1674	0.13193121607637825	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1668	0.131458344334169	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	1531	0.12066110622039132	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	1431	0.11277991051690398	No Hit
GTCTGGGACAGACTTCACTCTCACCATCAGCAGCCTAGAGCCTGGAGATT	1384	0.10907574853626494	No Hit
TAGTAATACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCT	1369	0.10789356918074183	No Hit
CAATAGGGGTAGGTCCCCTGTGGAAAAAGGGTCAGAGGCCAAAGGATGGG	1368	0.10781475722370695	No Hit
TATAAAAGGTGTCCAGTGTCAGGTGCAGGTGGTGGAGTCTGGGGGAGGCT	1301	0.10253435610237042	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2820	70.59586	1
TCAACGC	3055	62.73002	4
ATCAACG	3065	62.52536	3
CAACGCA	3115	61.519306	5
AACGCAG	3315	58.180412	6
TATCAAC	3350	57.85121	2
GGTATCA	1185	56.000095	1
CGCAGAG	3845	50.160744	8
GCAGAGT	4560	42.45345	9
ACGCAGA	5115	37.706367	7
GTAGACG	1140	34.12667	4
ACTACGC	1450	33.749428	8
CTACGCA	1495	32.733562	9
TAGACGG	1170	32.634567	5
GTACATG	3675	32.581425	1
TACATGG	3660	32.282543	2
TACTACG	1550	31.572046	7
ACATGGG	3735	31.055624	3
AGACGGC	1280	30.360527	6
TATACTA	2050	28.816938	5