EGAF00005280181 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280181
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1376389
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATATACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGTAGATACA	4285	0.3113218719417258	No Hit
GTATATTACTGTGCGAGATTTCAGTGGGGGGATGCTTTTGATATCTGGGG	2518	0.1829424675727574	No Hit
ACCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGA	2259	0.16412511288596465	No Hit
GTATGTGGTACTGGCAGCACCATACATAACTGAGACCCACTCCAGCCCCT	2229	0.16194549651297707	No Hit
ATATACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGTAGATACAGCG	1775	0.12896063540176506	No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA	1670	0.12133197809630852	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGTTTTGGAGATGGTTTT	1543	0.11210493545066112	No Hit
TCTCTACACAGTGAAACTTTTTTTAAAAAGAATAGTAAAGAAAATGCGGA	1517	0.11021593459407186	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1426	0.10360443159600956	No Hit
ATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGATAATG	1401	0.1017880846185199	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAATACG	595	0.0	43.55965	9
GTATCAA	3815	0.0	43.039318	1
TCAACGC	3795	0.0	40.977062	4
ATCAACG	3845	0.0	40.631447	3
CAACGCA	3935	0.0	39.336216	5
TATCAAC	4035	0.0	39.253464	2
AACGCAG	4085	0.0	38.068043	6
CGCAGAG	4220	0.0	36.850227	8
ACGCAGA	4300	0.0	35.99721	7
ATACGGC	1865	0.0	35.128647	6
TATACGG	1885	0.0	34.755928	5
GTGCTAG	845	0.0	34.090107	1
TACGGCC	1985	0.0	32.642307	7
CCGATCG	90	0.0037551965	31.99752	9
GTCCCGA	165	2.5154695E-6	30.551968	1
GCAGAGT	5195	0.0	30.211327	9
GTAATAT	2460	0.0	28.396297	1
AATATAC	2510	0.0	28.109375	3
CTAGAGA	1000	0.0	28.077826	4
GTACATG	4115	0.0	26.951067	1