FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences697087
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT8580.123083632315622No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC8530.12236636173103214No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA8390.1203580040941805No Hit
CTAGTGGACTGGGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCCCTC7540.10816440415615267No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC7460.10701677122080888No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)