FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences536862
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7490.13951443760221435No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA6530.1216327473354419No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGTTTTGGAGATGGTTTT6240.11623098673402103No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)