EGAF00005280267 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280267
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1527755
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATATACGGCTGTGTCTTCGACTCTCAGGCTACTCATTTGAAGAAAAA	4603	0.301291764713583	No Hit
GTATATTACTGTGCGAGATTCCTAAAGCCCCTGAGATTGGCGGCAGATGG	2736	0.17908630637765874	No Hit
ATATACGGCTGTGTCTTCGACTCTCAGGCTACTCATTTGAAGAAAAAGTG	2153	0.14092573743826725	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2062	0.13496928499661268	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT	2052	0.13431472978324405	No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT	1879	0.12299092459196666	No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA	1875	0.12272910250661918	No Hit
TCCTAAGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC	1849	0.12102725895186074	No Hit
GTATGGACGTGTGGGGCCAAGGGACAACGGTCACCGTCTCCTCAGCCTCC	1784	0.11677265006496461	No Hit
GCCGTATATTACTGTGCGAGATTCCTAAAGCCCCTGAGATTGGCGGCAGA	1777	0.11631446141560657	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGTTTTGGAGATGGTTTT	1653	0.10819797676983547	No Hit
CGTCCATACCGTAGATGTAAAAATTCTTCCCATCTGCCGCCAATCTCAGG	1601	0.10479428966031856	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	3030	68.03651	1
TCAACGC	3395	59.231754	4
ATCAACG	3460	58.119015	3
CAACGCA	3550	56.848606	5
AACGCAG	3655	55.409042	6
TATCAAC	3780	53.38957	2
GGTATCA	1305	53.024837	1
ACGCAGA	4140	48.892258	7
CGCAGAG	4310	46.772156	8
GCAGAGT	5140	39.49959	9
GTACACG	1060	33.99807	5
TATACGG	2130	33.83846	5
ATACGGC	2205	33.012203	6
TACGGCT	2235	32.229725	7
GTAATAT	2410	31.105337	1
TACACGG	1175	30.668594	6
CAGAGTA	4915	30.468176	9
AATATAC	2720	28.618378	3
ACACGGG	1280	28.138058	7
GTACATG	4080	28.090248	1