FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1071431
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT14410.13449302848246877No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14150.13206636731623408No Hit
GTACAAGGACGTTCGGCCAAGGGACCAGGGTGGAAATCAAACGAACTGTG13750.1283330424451038No Hit
CTCCTAAACTGCTCATTTACTGGGCATCTACCCGGGAATCCGGGGTCCCT11820.11031974994190014No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC11130.10387976453920039No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)