FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences600417
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAGAGAGCCGTGTCCTCGGCTCTGAGGCCATTCATTTCCAGAAACA27700.46134603117500006No Hit
CTCTATTACTGTGCAAGGGATTGGCACGATATGGCGGGTGGTCATTTTGA10910.181707046935713No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC8860.14756410961048738No Hit
CATTAGTAGCAGTGGTTTTTCCATTTTCTACGCAGACTCTGTGAAGGGCC8640.14389998950729244No Hit
GTGCTGGGTTTTCCTTGTTGCTATTTTAGAAGGTGTCGACTGTGAGGTGC7300.12158216706055958No Hit
CTCCTGTACTGGGAGCAACTCCAACATCGGGGCAAATTTTGGTGTACACT7170.11941700518139893No Hit
GTGTACAGGTCCCCGGAGGCATCCTGGCTGGGTGGGAAGTTTCTGGCGGT7100.11825114878492782No Hit
GTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAACTTCCCA6880.11458702868173286No Hit
TCACTGCACCGACCGGCCCTCGAGGACCTGCTCTTAGGTTCAGAAGCGAA6400.10659258482021662No Hit
CGTGCACACTGACCGGCCTGAGAGATGCCTCAGGTGTCACCTTCACCTGG6360.10592638116509027No Hit
GTGTGCACGTGAGGTTCGCTTCTGAACCTAAGAGCAGGTCCTCGAGGGCC6260.10426087202727438No Hit
GTGCAGTGACAGTCGGGGGTGGCAGCATGAGGGAGATGGGGTAGGTGGAG6200.10326156654458486No Hit
AGGTCACACTGAGTGGCTCCTGGGGGAAGAAGCCCTGGACCAGGCAGGCG6040.10059675192407942No Hit
GACCTAGGACGGTCAGCGTGGTCCCTCCGCCGAAAATCCTCGAACCACTC6030.10043020101029784No Hit
CTCCAGAGACAATGCCAGGAATTCACTGTTTCTGGAAATGAATGGCCTCA6010.10009709918273467No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)