FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1807908
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAGATAGCTGTGTCCTCAATTGTCAGGCCGCTCATCTGCAGAAACA62840.3475840584808519No Hit
ATCTATTACTGTGCGAGTGGCTTTAGTAATGGCCATAACTACTTTGACAA56550.31279246510331277No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT22070.12207479584138131No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT20000.11062509817977464No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT19310.1068085322925724No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)