EGAF00005280355 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280355
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	364389
Sequences flagged as poor quality	0
Sequence length	150
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	809	0.2220154834531229	No Hit
CTTATAATATTGCTGACAGTAGTAAACCGCCACATCTTCAGCCTGCAGGC	773	0.21213593165545613	No Hit
TATTATAAGAGTCCATTCACTTTCGGCCCTGGGACCAAACTGGAGCTCAA	688	0.18880921213318735	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	620	0.1701478365153723	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	430	0.11800575758324208	No Hit
GTAATATGTGGCCGTGTCCTCGGCGCGCAGGCGGTCCATGTGAAGATAAA	412	0.11306598168440869	No Hit
CATTATGGAAGACCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAATC	387	0.10620518182491788	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	370	0.10153983792046413	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTACGT	50	2.0809176E-4	57.58606	2
GTATCAA	1140	0.0	51.159554	1
ATCAACG	1355	0.0	43.03017	3
TCAACGC	1385	0.0	42.098106	4
CAACGCA	1410	0.0	41.351692	5
GCTAGAC	70	0.0010936201	41.132896	3
TATCAAC	1465	0.0	40.290585	2
TACACGG	180	7.8216544E-11	39.99032	6
AACGCAG	1485	0.0	39.263218	6
CGCAGAG	1525	0.0	38.228115	8
GTACACG	200	2.401066E-10	35.991287	5
ACGCAGA	1740	0.0	33.504528	7
GCAGAGT	1800	0.0	32.78756	9
ATAGGAC	110	2.537604E-4	32.71935	3
ACACGGG	225	8.5310603E-10	31.987862	7
CCGCGGT	90	0.0037571515	31.987862	9
GGTATCA	735	0.0	29.388708	1
GAGTTAC	570	0.0	29.041613	8
GTGTTAT	175	3.973424E-6	28.800932	1
AGTTACC	590	0.0	28.05715	9