FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences364389
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATAATATTGCTGACAGTAGTAAACCGCCACATCTTCAGCCTGCAGGC7300.20033535589713192No Hit
TATTATAAGAGTCCATTCACTTTCGGCCCTGGGACCAAACTGGAGCTCAA6430.17645977238610386No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT5890.1616404446896037No Hit
GTAATATGTGGCCGTGTCCTCGGCGCGCAGGCGGTCCATGTGAAGATAAA4220.11581030162820503No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT3870.10620518182491788No Hit
CATTATGGAAGACCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAATC3830.10510745384739933No Hit
ATATTATAAGAGTCCATTCACTTTCGGCCCTGGGACCAAACTGGAGCTCA3680.10099097393170486No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)