FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280371

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280371
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences700989
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGA11200.15977426179298107No Hit
ATAATAGACAGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGAAACA10580.15092961515801245No Hit
GTATATGTAACTTCCACTACTACTCATGGTTGAGACCCACTCCGGCGCCT10040.1432262132501366No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT9730.1388038899326523No Hit
GTCTATTATTGTACGAGATTCGGTTGGCCCAATGACGACAATTGGTTCGA9220.1315284547974362No Hit
GTGCAGTGACAGTCGGGGGTGGCAGCATGAGGGAGATGGGGTAGGTGGAG8450.12054397429916874No Hit
GTGTGCACGTGAGGTTCGCTTCTGAACCTAAGAGCAGGTCCTCGAGGGCC8170.11654961775434422No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7600.10841824907380858No Hit
GTGCCTAGCCGGCAAGTCCGTGACATGCCACGTGAAGCACTACACGAATC7580.10813293789203539No Hit
AGGTCACACTGAGTGGCTCCTGGGGGAAGAAGCCCTGGACCAGGCAGGCG7040.10042953598415952No Hit
CTCTCAGGCCGGTCAGTGTGCACGTGAGGTTCGCTTCTGAACCTAAGAGC7020.10014422480238633No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)