FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1845991
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATATACGGCCGTGTCGTCAGACCTCAGGTTCCTCAATTCCATGTAGA41850.2267074974905078No Hit
GTATATTACTGTGCGAGAGATCTTGGGACCCCCAATTACCTTGAAACCTA27050.14653375883197697No Hit
CCTTGGGAGAGTCCCCTAGATCACAGCTCCTCACCATGGACTGGACCTGG24060.13033649676515216No Hit
GTCTACATGGAATTGAGGAACCTGAGGTCTGACGACACGGCCGTATATTA20620.11170151967154769No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)