EGAF00005280412 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280412
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	786658
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATATACGGCCGTGTCCTCGGGTCTCAGGCTATTCATTTGCAGAGAGA	2004	0.2547485692638987	No Hit
GTATATTACTGTGCGAGGGAGCGTGACTTCGGAATGGACGTCTGGGGCCA	1758	0.22347703830635424	No Hit
ACCACATACTACTCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGA	1489	0.1892817463243239	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1189	0.15114573296146483	No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA	1187	0.1508914928723791	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	1138	0.1446626106897788	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC	1055	0.1341116469927211	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	1015	0.12902684521100655	No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC	1004	0.12762852472103506	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	948	0.1205098022266347	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	932	0.11847588151394889	No Hit
GTGCTGGGTTTTCCTTGTTGCTCTTTTAGAAGGTGTCCAGTGTGAGGTGC	911	0.11580636057854875	No Hit
ATATACGGCCGTGTCCTCGGGTCTCAGGCTATTCATTTGCAGAGAGAGGG	895	0.11377243986586293	No Hit
GCCGTATATTACTGTGCGAGGGAGCGTGACTTCGGAATGGACGTCTGGGG	891	0.11326395968769148	No Hit
GTATGTGGTAGGACCTCTAGGACTAATGTACGAAACCCACTCCAGCCCCC	853	0.10843339799506266	No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGG	831	0.10563675701511965	No Hit
GTCCTGGTGCAGGACGGTGAGGACGCTGACCACACGGTACGTGCTGTTGT	799	0.10156891558974802	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1055	65.47777	1
TCAACGC	1075	63.525436	4
CAACGCA	1145	59.64938	5
ATCAACG	1150	59.374916	3
AACGCAG	1180	58.504284	6
TATCAAC	1355	50.39199	2
CGCAGAG	1490	46.814877	8
ACGCAGA	1710	40.791912	7
GCAGAGT	1800	37.9533	9
GGTATCA	565	36.933853	1
ATACGGC	980	35.221966	6
TACGGCC	1050	32.18896	7
GTACATG	2110	30.692705	1
CAGCGCT	430	30.102491	9
ATATACG	1260	29.666431	4
AATATAC	1205	28.630665	3
TACATGG	2200	28.09655	2
ACATGGG	2220	27.84343	3
GTAATAT	1305	27.018465	1
CATACTA	1345	25.657053	5