EGAF00005280518 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280518
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1208395
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATAGACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGAAGAAACA	2548	0.21085820447784043	No Hit
GTCTATTACTGTGCGAGAGATGAAAATTGTAGTGGTGCCAATTGCTATCC	2182	0.1805700950434254	No Hit
GGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCGCTG	1608	0.13306907095775802	No Hit
TCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCC	1607	0.13298631656039622	No Hit
GTTTGGAGGGTTTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCCATCT	1450	0.11999387617459524	No Hit
CACTAGTGTGGCCTTGTTGGCTTGGAGCTCCTCAGAGGAGGGCGGGAACA	1399	0.11577340190914395	No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACAGTGGGGTTGGCCTTGGGCTGA	1350	0.11171843643841624	No Hit
ATCCCACACCTGACAGTAATAGTCGGCCTCATCCCCGGCCTCGACCCTGC	1335	0.11047712047798941	No Hit
GACCTAGGACGGTGACCTTGGTCCCAGTCCCGAAGACATAATGATCACTC	1325	0.1096495765043715	No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA	1322	0.10940131331228613	No Hit
ACCTAGGACGGTGACCTTGGTCCCAGTCCCGAAGACATAATGATCACTCC	1298	0.10741520777560318	No Hit
CCTATGTGCTGACTCAGCCTCCCTCAGTCTCAGTGGCCCCAGGGAAGACG	1264	0.10460155826530232	No Hit
CCCCTATCCTGGTCATCTGTTATGATTCCGACCGGCCCTCAGGGATCCCT	1212	0.10029832960248926	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1600	58.92737	1
TCAACGC	1590	57.43971	4
ATCAACG	1640	55.683884	3
CAACGCA	1680	53.941235	5
AACGCAG	1775	51.461567	6
TATCAAC	1915	47.687504	2
CGCAGAG	2180	40.911255	8
GGTATCA	725	40.70161	1
ACGCAGA	2360	38.400436	7
GCAGAGT	2545	34.761215	9
TAGACGG	1110	34.340965	5
ATAGACG	1170	33.80512	4
CTGTGCG	1580	33.230995	9
GTCTATT	1670	31.891941	1
ACATGGG	3285	29.331823	3
AATAGAC	1375	29.285656	3
TAATAGA	1445	28.3646	2
TCTATTA	1855	27.909897	2
ACTGTGC	2230	27.737751	8
GTACATG	4140	26.772327	1