FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences821492
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTTGGGCTGACCGAGGACGGTCAGGTGGGTGCCTCCTCCGAACACAGC13860.16871740686458297No Hit
GGCCTGGACCGTTCTCCTCCTCGGCCTCCTCTCTCACTGCACAGGCTCTG13830.1683522176722354No Hit
CCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGCCCCAGGAAAGACG12550.1527708121320719No Hit
CTACTAGTAGCCCACACCTGACAGTAATAGTCGGCCTCATCCCCGACTTC12060.14680605532372804No Hit
GTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGT11270.13718940659190837No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCCTCTGAGGAGC10660.1297638930141742No Hit
TCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGACCGATTCTCTGGC10160.12367740647504784No Hit
CCTTTAGTTCCAATGTTGTCACCCCCACAGGTCATCCTGGCCGTCTTTCC9970.12136454159017981No Hit
GTACATGGGAGTCTGGGCCTAAGGAAGCAGCACTGGTGGTGCCTCAGCCA9070.11040886581975234No Hit
GGCTCTGTGACCTCCTATGTGCTGACTCAGCCACCCTCGGTGTCAGTGGC8770.10675697389627653No Hit
CTTCATGCGTGACCCGGCAGCTGTAGCTTCTGTGGGACTTCCACTGCTCG8590.10456583874219104No Hit
GTGTTGGTCGTCTATGATGATAGCGACCGGCCCTCAGGGATCCCTGACCG8580.10444410901140852No Hit
ACACAGGGGCCTGACCTGGCTGCTGCAGGTACCAGTGCACACCTTTAGTT8520.10371373062671334No Hit
CCTCAGAGGAGGGTGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA8460.10298335224201817No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)