FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences722746
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATATAAGGCGGTGTCCTCAGTTCTCAGACTGTTCAGTTGCAAATACA18940.26205610269721313No Hit
TTATATTACTGTGTAAAAGACAGGCCTAATGGGAGCATTGACTATTGGGG17070.23618255929468995No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGTTTTGGAGATGGTTTT16280.22525202491608393No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA15660.2166736308467982No Hit
CTGTAGGACAGCTGGGAAGGTGTGCACGCCGCTGGTCAGAGCGCCTGAGT14940.20671162483085342No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT12240.16935410227106065No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC12010.16617179479374497No Hit
GTCTGAGAACTGAGGACACCGCCTTATATTACTGTGTAAAAGACAGGCCT11110.15371928727381404No Hit
GTTCTCAGACTGTTCAGTTGCAAATACAGGGAGTTTTTGCTGTTGTCTCT10960.15164386935382554No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC10710.14818483948717806No Hit
ATATAAGGCGGTGTCCTCAGTTCTCAGACTGTTCAGTTGCAAATACAGGG10300.1425120305058762No Hit
GCCTTATATTACTGTGTAAAAGACAGGCCTAATGGGAGCATTGACTATTG10250.14182022453254672No Hit
GCCCAGGGCCGCTGTGCTCTCGGAGGTGCTCCTGGAGCAGGGCGCCAGGG10160.1405749737805536No Hit
GGTCTGGAGTGCGTCGCTGTTATTCATCGTGACGGTGGTCTCACAGGCTA10080.1394680842232264No Hit
ATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAA9780.13531724838324943No Hit
GTGGTGGACGTGAGCCACGAAGACCCCGAGGTCCAGTTCAACTGGTACGT9210.1274306602872932No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTGGACCTCGGGGTCTTCGTGG8910.1232798244473162No Hit
CTCCAGACCCTTTCCCGGAGCCTGACGGACCCAGTGCATATTATAACGAC8800.12175785130599132No Hit
GTCTTTTACACAGTAATATAAGGCGGTGTCCTCAGTTCTCAGACTGTTCA8760.12120440652732772No Hit
GTCCTGGTGCACAACGGTGAGGACGCTGACCACACGGAACGTGCTGTTGA8690.12023587816466642No Hit
GTAAAAGACAGGCCTAATGGGAGCATTGACTATTGGGGCCAGGGAACCCT8690.12023587816466642No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC8250.11414798559936687No Hit
ATATTACTGTGTAAAAGACAGGCCTAATGGGAGCATTGACTATTGGGGCC8240.11400962440470096No Hit
CTCCTGTGCAGCCTCTGGATTCACGTTTGGTCGTTATAATATGCACTGGG8060.11151912290071476No Hit
CCTTCCCAGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTG7940.10985878856472399No Hit
GTGTGAACCTTGCAGGCAGTAATAAATCGCAACATCCTCAGCCTCCACCC7850.10861353781273089No Hit
GGTTCACACTGGCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAG7680.1062613975034106No Hit
CCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTGGTCGTTATAAT7500.1037708959994244No Hit
GGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCCGGGGAGCGGGG7380.10211056166343363No Hit
GCCCTGGGCTGCCTGGTCAAGGACTACTTCCCCGAACCGGTGACGGTGTC7320.10128039449543824No Hit
TTATAATATGCACTGGGTCCGTCAGGCTCCGGGAAAGGGTCTGGAGTGCG7310.10114203330077233No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)