EGAF00005280552 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280552
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1544104
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATATTACTGTGCGAGAGTCAAGTATTACGATTTTTGGAGTGGTTATGG	4118	0.2666918808577661	No Hit
GTAATATACGGCCGTGTCCGCAGCGGTTACAGAGGTCATCTTCAGGGAGA	3867	0.2504364990959158	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	3225	0.20885898877277698	No Hit
GTATTACTGTCAGCAGCATGGTAGCTCACTCTCGATCACCTTCGGCCAAG	2904	0.18807023361120753	No Hit
CTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCA	2829	0.18321304782579412	No Hit
ATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGT	2763	0.17893872433463032	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	2496	0.16164714293855853	No Hit
GTCTCTGGTGGCTCCGTCAGTAGTTACTACTGGAGCTGGATCCGGCAGCC	2139	0.13852693859999066	No Hit
TTCTTAGCCTGGTACCAGCAGAAACCTGGCCAGGCTCCCAGGCTCCTCAT	2091	0.13541833969732608	No Hit
ATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACC	2008	0.1300430540948019	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1921	0.12440871858372235	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	1845	0.11948677032117007	No Hit
CAGTAATACACTGCAAAATCTTCAGGCTCCAGTGTGCTGATGGTGAGAGT	1748	0.11320481003870206	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	1733	0.11223337288161937	No Hit
GTTAGGACCCAGAGGGAACCATGGAAACCCCAGCGCAGCTTCTCTTCCTC	1712	0.11087336086170362	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	1694	0.1097076362732044	No Hit
GGTTATGGGTTAGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGCTCAC	1609	0.10420282571640253	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAACGC	2050	53.317635	4
GTATCAA	2185	52.060513	1
ATCAACG	2145	50.949635	3
TATCAAC	2370	46.71939	2
AACGCAG	2405	46.360996	6
CAACGCA	2380	45.927834	5
CGCAGAG	2565	43.19004	8
ACGCAGA	2840	39.00664	7
GTACATG	4060	37.061504	1
TACATGG	4110	36.037132	2
ACATGGG	4130	35.166256	3
TATACGG	2070	35.088142	5
GCAGAGT	3240	34.414143	9
ATACGGC	2180	33.657345	6
GGTATCA	975	33.228497	1
TACGGCC	2230	32.580124	7
AATATAC	2700	29.026022	3
GTAATAT	2780	27.96931	1
CATGGGG	2330	27.775875	4
ATATACG	2695	27.21589	4