FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1040129
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC22820.2193958633977132No Hit
GACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAATATCAAAGTGGTAGAA17330.1666139488467296No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16850.16199913664555068No Hit
GTAATACATGGCGGTGTCCGAGGCCTTCAGGCTACTCCATTGCAAGTAGG15800.15190423495547187No Hit
GTAATATTCAGCCTCGTCCTCAGCCTGGAGCCCAGAGATTGTCAGGGAGG14900.14325146207826145No Hit
CTCCTGGACAGTCGATCAGCATCTCCTGCTCTGGAACCAGTAGTGATATT13780.13248356694217736No Hit
GCCTTGGGCTGACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAATATCAA13010.12508063903611955No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT12650.12161952988523539No Hit
CCCTTATGATTTCCCGGACCCCTGAGGTCACGTGCGTGGTGGTGGACGTG11980.11517802118775652No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA11890.11431274390003549No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA11420.10979407361971448No Hit
GTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGT11110.10681367407311979No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC11110.10681367407311979No Hit
GTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTC11030.10604453870625664No Hit
ACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAATATCAAAGTGGTAGAAG10930.10508311949767768No Hit
ATGTATTACTGTGCAACGTCGGTCGAAAATACTGGTTATTACCATCTTCA10780.10364099068480928No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC10580.10171815226765141No Hit
GTCTGGAGCAGAGGTGAAAAACCCCGGGGAGTCTCTGAGGATCTCCTGTA10470.10066059113821457No Hit
GTGTACACCTGTGGTTCTCGGGGCTGTCCTTTGGTTTTGGAGATGGTTTT10410.10008373961306721No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)