EGAF00005280560 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280560
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	799805
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTACTACACCGATCTCTCACACAGAAATACAGAGCCGTGTCCTCAGATCT	2076	0.25956326854670825	No Hit
TCTAAGAGGTGTCCAGTGTCAGGTGCAACTGGTGGAGTCTGGGGGAGGCG	1887	0.23593250854895884	No Hit
GTGTAGTAGTACCAGTTGTATATTACCCATTGATGCTTTTGATATGTGGG	1860	0.23255668569213744	No Hit
ATATACAACTGGTACTACTACACCGATCTCTCACACAGAAATACAGAGCC	1525	0.190671476172317	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1300	0.1625396190321391	No Hit
GTTGTATATTACCCATTGATGCTTTTGATATGTGGGGCCAAGGGACAATG	1172	0.1465357180812823	No Hit
GTATCTGCATATGAACAACCTGAGATCTGAGGACACGGCTCTGTATTTCT	1100	0.1375335237964254	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	1054	0.13178212189221122	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	1008	0.12603071998799706	No Hit
TGCAGATACAGCGTGCTCTTGGAGTTGTCTCTGGAGATGGTGAACCGGCC	1007	0.1259056895118185	No Hit
GCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGC	985	0.12315501903588999	No Hit
TAACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGT	965	0.12065440951231862	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	957	0.11965416570289009	No Hit
GTATAGTGACTGGCCTCCACTCACTTTCGGCGGAGGGACCAAGGTGGAGA	876	0.10952669713242603	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC	871	0.10890154475153319	No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA	866	0.10827639237064035	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	846	0.10577578284706897	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAACGCA	885	0.0	44.7657	5
TCAACGC	895	0.0	44.265526	4
ATCAACG	905	0.0	43.77641	3
AACGCAG	920	0.0	43.043797	6
TATCAAC	1060	0.0	38.054688	2
TATTACG	100	1.445203E-4	36.01604	2
CGCAGAG	1105	0.0	35.837368	8
CAGCGCT	435	0.0	33.101624	9
GTATCAA	1525	0.0	29.76124	1
TACACCG	1490	0.0	28.522772	5
TACACGG	620	0.0	27.871174	6
GCAGAGT	1480	0.0	27.728199	9
ACATGGG	1775	0.0	27.59539	3
GTACATG	1890	0.0	27.444231	1
TACACCC	1050	0.0	27.440794	5
ACACGGG	630	0.0	27.428774	7
GTACACG	610	0.0	27.15964	5
ACCGATC	1460	0.0	27.12349	8
GTATTGG	295	5.18412E-10	26.862783	1
ACGCAGA	1475	0.0	26.847654	7