FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences951369
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAGACGGCCGTGTCGTCAGATCTCAGGCCTCTCAGCTCCATGTAGG32360.3401414172629127No Hit
GATTATTACTGTGCAGCATGGGATGGCAGCCTGAGTGGTCGGGTGTTCGG25920.27244949120688183No Hit
GTCTATTACTGTGCGGATCTGGACTGGAACGCCTCTGTCCCCCTCCATTT25100.26383033292024444No Hit
CCTGTATACTGGTACCAGCACCTCCCAGGAACGGCCCCCAAACTCCTCAT21710.22819747122304804No Hit
GTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCGGCGTCT20910.2197885363092554No Hit
GTAATAATCAGCCTCATCCTCGGACCGGAGCCCACTGATGGCCAGGGAGG20470.21516362210666942No Hit
GTCCTGGGCCCAGTCTGTGCTGACTCAGCCACCCTCGGCGTCTGGGACCC20130.21158982476830757No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC18650.19603329517779117No Hit
GTCTGGGGCTGAGGTGAAGAAGCCTGAGTCCTCGGTGAAGGTCTCCTGCA17480.18373522786636942No Hit
GCCTTGGGCTGACCAAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCCG17410.18299944606141255No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT16710.175641628011844No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC16090.16912470345365468No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA15490.16281800226831017No Hit
CCTCACTCACTGTGCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCAC15430.16218733214977574No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA14710.15461929072736236No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC14530.152727280371759No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGA14480.15220172193964698No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT14150.1487330362877075No Hit
ACCTACATGGAGCTGAGAGGCCTGAGATCTGACGACACGGCCGTCTATTA13010.136750304035553No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC12800.1345429586206824No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA12640.13286117163792388No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT12400.13033849116378607No Hit
GTGCTGACTCAGCCACCCTCGGCGTCTGGGACCCCCGGGCAGAGGGTCAC12360.12991804441809643No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG11980.12592380033404493No Hit
GTACATGGGAGCTTCAGCTGTGGTAGAGAAGACAGGATTCAGGACAATCT11790.1239266782920192No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG11370.11951198746227804No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCC11190.11761997710667471No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT11080.11646374855602822No Hit
GTCCTGGTGCAGGACGGTGAGGACGCTGACCACACGGTACGTGCTGTTGT10980.11541263169180412No Hit
GTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCA10960.11520240831895932No Hit
TCTATAGGGATACTCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGC10950.1150972966325369No Hit
TCCTTGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC10790.11341550964977837No Hit
GTCCTTGGTAGAGCGAACTACGCACAGAAGTTCCAGGGCAGAGTCACGAT10600.11141838760775262No Hit
CCCAGGAACGGCCCCCAAACTCCTCATCTATAGGGATACTCAGCGGCCCT10510.11047238242995094No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGG10410.10942126556572687No Hit
GGGATACTCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTGGCTCCAAG10100.1061628032866322No Hit
CATCTATAGGGATACTCAGCGGCCCTCAGGGGTCCCTGACCGATTCTCTG10010.10521679810883053No Hit
GTTGGAGACCTTGCACTTGTACTCCTTGCCATTCAGCCAGTCCTGGTGCA9990.10500657473598571No Hit
CTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCACTGCTCA9920.10427079293102885No Hit
CTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCATGCGTGACCTGG9830.10332478775322718No Hit
GTCTTGTAGTTGTTCTCCGGCTGCCCATTGCTCTCCCACTCCACGGCGAT9810.10311456438038238No Hit
GCCCAGGGCAGCGCTGGGTGCTTTATTTCCATGCTGGGCGCCCGGGAAGT9730.1022736708890031No Hit
GTCTTCTCCACGGTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTCT9670.10164300077046866No Hit
GTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGT9650.10143277739762385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)