EGAF00005280663 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280663
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	671216
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATATACGGCCGTGTCCTCGGCTCTCAGGCTGCTCATTTGCAGATACA	2033	0.30288312555123836	No Hit
GTATATTACTGTGCGGCCAACCGCCTGCCATGGGCTTTTGATCTCTGGGG	1619	0.2412040237419847	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1186	0.17669423851636432	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	1050	0.1564325045886868	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1021	0.15211198779528498	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	970	0.1445138375724059	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC	964	0.14361993754618485	No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA	939	0.13989535410359705	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	925	0.1378095873757479	No Hit
GTGGTGGACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAACTGGTACGT	916	0.1364687373364163	No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC	845	0.125890920359467	No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG	836	0.1245500703201354	No Hit
ATATACGGCCGTGTCCTCGGCTCTCAGGCTGCTCATTTGCAGATACAGCG	829	0.12350718695621082	No Hit
GCCGTATATTACTGTGCGGCCAACCGCCTGCCATGGGCTTTTGATCTCTG	778	0.11590903673333174	No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG	759	0.11307835331696503	No Hit
ATATTACTGTGCGGCCAACCGCCTGCCATGGGCTTTTGATCTCTGGGGCC	751	0.11188648661533693	No Hit
GTTATGTATCCTGGTACCAGCAACTCCCAGGAACAGCCCCCAAACTCCTC	698	0.10399036971705083	No Hit
TCCTAGGTCAGCCCAAGGCCAACCCCACTGTCACTCTGTTCCCGCCCTCC	685	0.10205358632690521	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	475	0.0	71.27227	1
GTATCAA	1195	0.0	71.126335	1
TCAACGC	1335	0.0	60.94237	4
ATCAACG	1385	0.0	59.262127	3
CAACGCA	1420	0.0	57.80144	5
TATCAAC	1445	0.0	56.303154	2
AACGCAG	1490	0.0	55.569145	6
GCAGAGT	2050	0.0	41.79101	9
CGCAGAG	2245	0.0	37.519695	8
GGACCGA	80	0.0021067318	35.99914	6
ACGCAGA	2630	0.0	32.027267	7
GTACACG	520	0.0	31.845394	5
CAGCGCT	340	0.0	31.761583	9
TATACGG	1085	0.0	31.188198	5
ATACGGC	1100	0.0	30.762903	6
GTACATG	1505	0.0	30.630903	1
TACATGG	1490	0.0	30.442228	2
TACGGCC	1130	0.0	29.94396	7
TACACGG	555	0.0	29.837128	6
CAGAGTA	2015	0.0	29.297367	9