FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1501005
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCATTATAGTGGCAACACCAACTCCAACCCGTCCCTCAAGGGTCGACT25820.17201808121891665No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT24770.1650227680787206No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC21370.14237127791046666No Hit
GAATATATGTCAGACGAACTGTGGCTGCACCATCTGTCTTCATCTTCCCG15590.10386374462443497No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15270.10173183966742283No Hit
GTCACATCCTGGCTGGGATTCGTGTAGTGCTTCACGTGGCATGTCACGGA15080.10046602109919688No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)