FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences882637
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC21730.24619407525403986No Hit
GATGTACACTGGTACCAGCAGTTTCCAGGAACAGCCCCCAAACTCCTCAT15170.1718713355547071No Hit
GACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCCAAGCACCCAGG14920.16903891407226299No Hit
CTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACT13400.15181779145900298No Hit
GGTTATGATGTACACTGGTACCAGCAGTTTCCAGGAACAGCCCCCAAACT12460.1411678866850132No Hit
GTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCC12270.1390152463583557No Hit
TCTCTACACAGTGAAACTTTTTTTAAAAAGAATAGTAAAGAAAATGCGGA11770.13335040339346751No Hit
GTCATAGGACTGGCAGTAATAATCAGCCTCATCCTCAGCCTGGAGCCCAG11200.12689248241349502No Hit
GCCTTGGGCTGACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCCA11150.1263259981170062No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT10460.11850851482546051No Hit
CTTCTATACTCCGTGAATCTCGAACAGTAATACACGGCCGTGTCTGCGGC10430.11816862424756723No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC10330.1170356556545896No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT10040.11375004673495445No Hit
TCCTATGACAGAAGCCTGGGTGCTTGGGTGTTCGGCGGAGGGACCAAGCT9740.11035114095602155No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA9390.10638575088059983No Hit
GTGCTAGAGAATACGTACCATGAAATACATATATTTCATAAGGTTCAGTT9180.10400651683534681No Hit
GTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAACTGGATCCG9030.10230706394588035No Hit
ACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCCAAGCACCCAGGC8960.10151398593079601No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)