FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences900385
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAGACAGCCGTGTCCTCGCCTCTCAGACTGTTCATGTCCAGATATA20200.22434847315315115No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT19910.22112762873659603No Hit
GTCTATTACTGTCAGCAATATTTTAAAACTCGCCTCACTTTCGGCGGAGG19050.21157615908750146No Hit
GTCTATTACTGTACGACTCATCCCGGGACCAACAGCTGGGACAAAGATTA17790.1975821454155722No Hit
CTTTTATATAGTTCCAATGGCAAGAACTATTTAGCTTGGTTTCAACAGAA17760.1972489546138596No Hit
GTAATAGACTGCCACATCGTCAGCCTGCAGGCTGCTGATGGTGAGAGTGA15880.17636899770653663No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC14650.16270817483632002No Hit
CTATTACTGTCAGCAATATTTTAAAACTCGCCTCACTTTCGGCGGAGGGA14600.16215285683346567No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT12200.13549759269645764No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT11970.1329431298833277No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA11600.1288337766622056No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT10720.11906017981196933No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC10600.11772741660511891No Hit
ATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCG10580.11750528940397718No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC10030.11139679137257952No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA9900.10995296456515824No Hit
CAGTAATAGACTGCCACATCGTCAGCCTGCAGGCTGCTGATGGTGAGAGT9630.10695424734974482No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC9620.10684318374917397No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)