EGAF00005280723 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280723
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	535519
Sequences flagged as poor quality	0
Sequence length	150
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTTGATACCACTGCTTGATACCACTGCTTGATACCACTGCTTGATACCA	2075	0.3874745807338302	No Hit
GTATCAAGCAGTGGTATCAAGCAGTGGTATCAAGCAGTGGTATCAAGCAG	2047	0.3822460080781448	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	1159	0.21642556099783572	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	895	0.16712759024423038	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	880	0.1643265691786846	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	783	0.14621329962148868	No Hit
GTGGTATCAAGCAGTGGTATCAAGCAGTGGTATCAAGCAGTGGTATCAAG	769	0.143599013293646	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT	738	0.1378102364248514	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	597	0.11148063840872126	No Hit
TGATACCACTGCTTGATACCACTGCTTGATACCACTGCTTGATACCACTG	542	0.10121022783505347	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATCCG	45	0.009906631	47.996517	5
ACAACGG	45	0.009910286	47.99203	8
CAGCGCT	205	7.2759576E-12	38.627735	9
ACGTACA	80	0.0021068563	35.997387	4
TATACGC	100	1.4497715E-4	35.994022	7
TCGATTA	110	2.531107E-4	32.737125	1
TACGCTA	110	2.5380554E-4	32.72184	9
GTGCTAG	150	4.59786E-5	28.80867	1
AGAATCG	230	1.1707289E-6	25.04166	5
GACCGCG	145	0.0012773861	24.823465	7
ATCAACG	3480	0.0	24.205137	3
GCCCATA	210	1.635002E-5	24.007225	1
GTACAGG	300	1.8273568E-8	24.007225	1
AGTACCG	150	0.0015562782	23.996017	7
TCAACGC	3535	0.0	23.828537	4
CAACGCA	3630	0.0	23.204927	5
TATCAAC	3705	0.0	23.123827	2
CGCAGAG	3620	0.0	23.067993	8
AACGCAG	3660	0.0	23.01472	6
GTACCGC	160	0.002265226	22.496265	8