EGAF00005280755 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280755
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1001139
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1830	0.18279180013964094	No Hit
GCATTATGTATCCTGGTACCGCCAGCTCCCAGGAACAGCCCCCCAACTCC	1760	0.17579976406872572	No Hit
GTAATAGACGGCCGTGTCTGCGGCGGTGACAGAGGTCAGGTCCAGGGAGA	1751	0.1749007880024652	No Hit
CTTCAGAGGAGGGCGGGAACAGAGTGACAGTGGGGTTGGCCTTGGGCTGA	1096	0.10947530762461556	No Hit
GTCTCTGGTGGCTCCATCAGTAGTGACTTCTGGAGCTGGATCCGGCAGCC	1092	0.10907576270627756	No Hit
CACTAGTGTGGCCTTGTTGGCTTGGAGCTCTTCAGAGGAGGGCGGGAACA	1083	0.10817678664001701	No Hit
CCTCTGAAGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGT	1048	0.10468076860455941	No Hit
TCTCTACACAGTGAAACTTTTTTTAAAAAGAATAGTAAAGAAAATGCGGA	1027	0.10258315778328485	No Hit
GTGCTAGAGAATACGTACCATGAAATACATATATTTCATAAGGTTCAGTT	1014	0.1012846367986863	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	890	76.97198	1
GTATCAA	2680	66.46014	1
TCAACGC	2690	64.00126	4
CAACGCA	2780	61.923084	5
AACGCAG	2890	59.275444	6
TATCAAC	2980	58.256405	2
ACGCAGA	3310	51.751503	7
ATCAACG	3470	49.822403	3
CGCAGAG	3510	48.597645	8
GCAGAGT	3960	43.25694	9
TAGACGG	970	37.127674	5
GAATACG	420	35.986866	9
AGACGGC	1030	35.63926	6
ATAGACG	995	35.47447	4
GACGGCC	1030	34.23993	7
GTACATG	2700	32.85038	1
GTAATAG	1245	32.435284	1
TACATGG	2745	31.753084	2
GTGCTAG	600	30.04608	1
AATAGAC	1220	29.522495	3