FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1547335
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC22270.1439248772890163No Hit
GTAATATACGGCCGTGTCCTCGGCACTCAGGCTGTTCATTTGCAGAGACA22210.14353711381181192No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT20170.13035315558686386No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA18440.11917264199413831No Hit
GTATATTACTGCGCGAGGCTCCGACCGTTTGGTGGGAGCTACTACATTGA16330.10553629304578516No Hit
GCATAATATGTGCTACTACCACCGTTTAACATAACTGAGACCCACTCCAG16170.10450225710657356No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)