FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences993838
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTATTACTGCTCGAGAGGTGAAGATAGTTCGACTTTTGGAGTGGTTCT25610.2576878726714012No Hit
GTAATAAGTAGCCGTGTCTTCAGGTCTCAGGCTGTCCATTTGCAGAAACA18700.18815943845978922No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT16510.16612365395567485No Hit
TTTAAGAGGTGTCCTGTGTCAGGTGCGGTTGGTGGAGTCTGGGGGAGGCG16410.16511745375000755No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA15960.1605895528245046No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT15860.15958335261883727No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC15440.15535731175503453No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA14160.14247794912249281No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT13960.14046554871115816No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC13400.13483082755942116No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTTGTGCACCAGG12570.12647936585238237No Hit
ATATTACGCAGACTCCGTGGAGGACCGATTCACCATCTCCAGAGACAATT11450.11520992354890837No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGG11390.114606203425508No Hit
GCCCAGGGCAGCGCTGGGTGCTTTATTTCCATGCTGGGCGCCCGGGAAGT10810.10877024223263751No Hit
CTCCTGTGCAGTCTCTGGATTCACCTTCAGTAATCATGCTTTCTACTGGG10210.10273304099863358No Hit
GTGGTGGACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAACTGGTACGT10060.1012237406901326No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)