FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280813

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280813
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences905716
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAATCAGCCTCATCATCAGACTGGAGCCCACTGATGGCCAGGGAGG29940.33056719766461007No Hit
GATTATTACTGTGCAGCATGGGATGCCAGATTGAATGGTCCGGTGTTCGG26680.2945735749396058No Hit
GTCTACTACTGTGCGAGAAGGTTAACTCCCAATAGACACGGCATGGACGT20880.23053584125708276No Hit
GTAGTAGACAGCCGTGTCGTCGACTCTCAGGTTGTTCATTTCCAGATAGA19910.2198260823481091No Hit
GCCTTGGGCTGACCAAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCGG17810.19664000635960943No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC16470.1818450816812334No Hit
CCTCACTCACTGTGCAGTTCCAGGGTCCTGGGCCCAGTCTGTGCTGACTC15490.1710249128866002No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14820.1636274505474122No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGA14260.15744449695047896No Hit
CCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCA13660.15081990381090762No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT12960.14309121181474105No Hit
GTGCTGACTCAGCCACACTCAGTGTCTGGGACCCCCGGGCAGAGGGTCAC12820.14154547341550772No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCC11640.1285171069076841No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA11540.12741300805108885No Hit
TCCTTGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC11420.1260880894231746No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT10670.11780734799871041No Hit
GTTCCAGGGTCCTGGGCCCAGTCTGTGCTGACTCAGCCACACTCAGTGTC10040.1108515252021605No Hit
GTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTTTGTGGGACTTCCA9830.10853291760331053No Hit
GGGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAG9790.10809127806067245No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG9780.10798086817501293No Hit
GTACATGGGAGCTTCAGCTGTGGGTAGAGAAGACAGGACTCAGGACAATC9780.10798086817501293No Hit
GTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGT9400.10378529251995107No Hit
GTCTTCTCCACGGTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTTT9360.10334365297731299No Hit
CTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCATGCGTGACCTGG9360.10334365297731299No Hit
CTTCATGCGTGACCTGGCAGCTGTAGCTTTTGTGGGACTTCCACTGCTCA9240.1020187343493987No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)