EGAF00005280920 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005280920
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	524194
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GTAATATACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACA	1914	0.3651319931170521	No Hit
GTATATTACTGTGCGAAAGATAATCGACCTAGCAGCAGTTGGTCGCGCGG	1204	0.22968595596286873	No Hit
GTATGTGCTACTGCCACCGCTATAAATAACTGAGACCCACTCCAGCCCCT	1142	0.21785827384517947	No Hit
GTATAATAACTGGCCTCCGCTCACTTTCGGCGGAGGGACCAAGGTGGAGA	1023	0.19515675494187265	No Hit
AGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGA	913	0.17417215763629496	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	786	0.14994448620167342	No Hit
ATATACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACAGCG	704	0.13430142275569734	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	702	0.13391988462286863	No Hit
TTATTATACTGCTGACAGTAATAAACTGCAAAATCTTCAGACTGCAGGCT	616	0.11751374491123516	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	602	0.11484297798143436	No Hit
GTTATTATACTGCTGACAGTAATAAACTGCAAAATCTTCAGACTGCAGGC	589	0.1123629801180479	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	587	0.11198144198521921	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	554	0.1056860627935459	No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA	531	0.10129837426601603	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACGGC	795	0.0	47.093807	6
TATACGG	815	0.0	45.951286	5
TACGGCC	815	0.0	45.93813	7
ATATACG	925	0.0	40.486813	4
AATCCGC	75	0.001534114	38.399567	6
AATATAC	1070	0.0	38.365692	3
GTAATAT	1005	0.0	37.984222	1
TAATATA	1185	0.0	32.82229	2
GTACACG	410	0.0	31.618452	5
TCAACGC	1470	0.0	30.375704	4
ATCAACG	1505	0.0	29.66929	3
CAACGCA	1560	0.0	28.623259	5
AACGCAG	1595	0.0	27.987146	6
CGCAGAG	1600	0.0	27.899685	8
ACACGGG	470	0.0	27.574158	7
TATCAAC	1610	0.0	27.289614	2
TACACGG	475	0.0	27.283903	6
GTATCAA	1640	0.0	27.2296	1
ACGGGGT	500	0.0	25.919708	9
GTACATG	2065	0.0	25.462215	1