FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences780697
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT10930.1400030997941583No Hit
CGTATATACTGATGGAAACACCTTCTTGCATTGGTTTCAGCAGAGGCCGG10230.13103675305528265No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC8100.10375344083556105No Hit
ATATAGGGCCGTGTCGTCGGCGCTCAGGCTGCTCATGTGCAAGTAGAGCG7870.1008073554785019No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)