FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280929

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280929
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1014588
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCATAGACAGGTCTAAGGACCAGTTCTCCCTGAAGCTGAACTCTGTGAC31590.31135791079728914No Hit
GTCTATGGATATGGTGATTCGACTCTTGAGGGACGGGTTGTAGAAGGTGG23320.2298469920795436No Hit
TCTATAAGGTGTCTACTTTAGAAAGCGGGGTCCCATCAAGGTTCAGCGGC22530.22206058025523662No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT19010.18736669465832437No Hit
GTATAGTGGGGGTTGGTCGTTCGGCCAAGGGACCACGGTGGAAATCAAAC17850.17593348235934192No Hit
GTCTCTGGTGGCTCCATGATCAATCCTACTTACTACTGGGGCTGGATCCG17690.17435648755948227No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14710.14498495941209633No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC13730.13532586626295598No Hit
CCTTATAGATCAGGACCTTAGGGGCTTTCCCTGGTTTCTGCTGATACCAG13580.13384743363808757No Hit
ATCTATGATAGTGGGACCACCTTCTACAACCCGTCCCTCAAGAGTCGAAT10340.10191328894092971No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)