FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005280979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005280979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences980747
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAAACGGCCGTGTCCTCGCCTCTCAGGCTGCTCATTTGCAGATACA28760.2932458625924933No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT15550.15855261346708174No Hit
GTTTATTACTGTGCGAAACTCACCCCCCTTTTGACGGCCTTTGACTTCTG15300.15600353608015116No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA15170.15467801583894725No Hit
GTATTATTGCAGTTCATATGCAGGCAGCAACAATTTTTATGTCTTCGGAA14960.15253679083392557No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC14730.15019163963794943No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC13400.1366305479394788No Hit
GTATGTGCTACCACCACTACCAGTAATAGTTGAGACCCACTCCAGCCCCT13190.13448932293445712No Hit
CCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGT12640.12888135268320983No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA12540.12786172172843763No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC11730.11960271099478255No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT11470.11695167051237476No Hit
AGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGA11440.11664578122594307No Hit
GCAATAATACTCAGCCTCATCCTCAGCCTGGAGCCCAGAGACGGTCAGGG11390.11613596574855697No Hit
CACTAGTGTGGCCTTGTTGGCTTGGAGCTCCTCAGAGGAGGGCGGGAACA11350.11572811336664807No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACAGTGGGGTTGGCCTTGGGCTGA10900.11113977407017304No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10560.10767302882394746No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG10530.1073671395375158No Hit
GTACATGGGAGCTCTGAGAGAGGAGCCCAGCCCTGGGATTTTCAGGTGTT10380.10583769310535746No Hit
GTTTGGAGGGTTTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCCATCT10020.10216702166817743No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)