FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281012

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281012
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1067362
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATATACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACA45650.4276899496140953No Hit
GTATATTACTGTGCGAAAGATGGTATTACTATGGTTCGGGGAGTTATCCC28740.2692619748501446No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT20110.18840843125387638No Hit
TAGTAATACCATCTTTCGCACAGTAATATACGGCCGTGTCCTCGGCTCTC17150.1606765090006952No Hit
ATATACGGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACAGCG17040.15964593080885398No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC15930.14924645996391103No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA15900.14896539318431798No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC14530.13613001024956856No Hit
GTATGTGCTACCACCACTACCACTAATAGCTGAGACCCACTCCAGCCCCT14300.13397516493935516No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT14000.13116449714342462No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA13610.12751062900871493No Hit
GTATTACTATGGTTCGGGGAGTTATCCCCCACAATGATGCTTTTGATATC13400.1255431615515636No Hit
AGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGA13180.12348200516788119No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC12930.12113978200460575No Hit
GCCGTATATTACTGTGCGAAAGATGGTATTACTATGGTTCGGGGAGTTAT12300.11523737963315163No Hit
GCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTA11460.10736750980454615No Hit
GTCTTGTAGTTGTTCTCCGGCTGCCCATTGCTCTCCCACTCCACGGCGAT11340.10624324268617394No Hit
ATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATT11050.10352626381677445No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG11040.10343257489024342No Hit
CTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGG11000.10305781918411934No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG10930.10240199669840223No Hit
GTCCTGGTGCAGGACGGTGAGGACGCTGACCACACGGTACGTGCTGTTGT10750.1007155960208439No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)