FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences536040
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTATAACCCGTCCCTCAAGAGTCGAGTCTCCATATCCGCAGACGCGTCC11410.2128572494589956No Hit
GTCTCTGGTGGCTCCATCAGCAGTAGTTACTATTGGGGCTGGATCCGCCA9260.17274830236549513No Hit
CTATTATAGTGGGAGCACCTACTATAACCCGTCCCTCAAGAGTCGAGTCT9100.1697634504887695No Hit
ATAATAGACAGCCGTGTCTGCGGCGGTCACAGAGCTCAGCTTCAGGGAGA8150.15204089247071115No Hit
GTCTATTATTGTGCGAGACATAGAGGAGTGGTTATGATGGTAGGTTGGTT6600.12312513991493172No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT6400.1193940750690247No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT6350.11846130885754794No Hit
CTCTATTATAGTGGGAGCACCTACTATAACCCGTCCCTCAAGAGTCGAGT6300.11752854264607118No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA5860.10932019998507574No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC5720.10670845459294083No Hit
CCTCTATGTCTCGCACAATAATAGACAGCCGTGTCTGCGGCGGTCACAGA5510.10279083650473846No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)