FastQCFastQC Report
Thu 12 May 2022
EGAF00005281099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35604111
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATAC1057020.29688144720142007No Hit
TGTTCCGTTGGTCAAGTTATTGGATCAATTGAGTATAGTAGTTCGCTTTG699630.19650258926560477No Hit
GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGA668030.18762720967811836No Hit
ACGCCGAGTTCCTTTTACTTTTTTTAACCTTTCCTTATGAGCATGCCTGT646870.18168407575181417No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGT616210.1730727106204112No Hit
ACGGGCTGTTAATTGTCAGTTCAGTGTTTTAATCTGACGCAGGCTTATGC560610.15745653640951743No Hit
GGTGAAGTCTTAGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTC521230.14639601589827647No Hit
CGTTGGGTTGACAGTGAGGGTAATAATGACTTGTTGGTTGATTGTAGATA492000.13818628977985153No Hit
AGGGTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTG489140.1373830117538955No Hit
GCACTCTACTCTCAGTTTACTGCTAAATCCACCTTCGACCCTTAAGTTTC461650.1296619932456676No Hit
ATGAGGGTAATAATGACTTGTTGGTTGATTGTAGATATTGGGCTGTTAAT416620.1170145773334995No Hit
CATGCCTGTGTTGGGTTGACAGTGAGGGTAATAATGACTTGTTGGTTGAT407320.11440251941692912No Hit
AGTTGGTTGATTGTAGATATTGGGCTGTTAATTGTCAGTTCAGTGTTTTA405270.11382674320951308No Hit
TGCTACCTTTGCACGGTTAGGGTACCGCGGCCGTTAAACATGTGTCACTG404370.1135739634111353No Hit
CAGTCCTTTGAAGTATACTTGAGGAGGGTGACGGGCGGTGTGTACGCGCT400870.1125909308618884No Hit
GCCTCTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATA393040.11039174661600173No Hit
AGTGAGGGTAATAATGACTTGTTGGTTGATTGTAGATATTGGGCTGTTAA380960.10699887998888667No Hit
CTGCTGTTAATTGTCAGTTCAGTGTTTTAATCTGACGCAGGCTTATGCGG377660.10607202072816817No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACT367860.10331952959027679No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)