FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2314960
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATACACAGCCGTGTCGTCGTCTCTCAGGCTATTCATTTGCAGATACA41380.178750388775616No Hit
GTATAATAACTGGCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGA39300.16976535231710266No Hit
GTGTATTACTGTGCGAGAGATGACTACACTGACTACTGGGAAGACACCTA36040.15568303556000967No Hit
ACCATACATTATGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGA33900.14643881535750078No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT33000.1425510591975671No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT27320.11801499809931922No Hit
TTATTATACTGCTGACAGTAATAAACTGCAGAATCTTCAGACTGCAGGCT24430.10553098109686561No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT23780.10272315720358019No Hit
GTACTACCATACATTATGCAGACTCTGTGAGGGGCCGATTCACCATCTCC23670.10224798700625498No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)