EGAF00005281108 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281108
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1612560
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATACACAGCCGTGTCCTCAGGTCTCAGGCTGTTCATTAGCAGATACA	3884	0.24085925484943196	No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC	3514	0.21791437217839957	No Hit
GTGTATTACTGTGCGAAAGATCTCCGATACAGTTATGGTTACGGGGCTAT	3322	0.20600783846802598	No Hit
GACCTAGGACGGTCAGTTTGGTCCCTCCGCCGAACACCAGAGTGTTGGTG	2663	0.16514114203502506	No Hit
GTCCTGGGCCCACTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTC	2414	0.14969985612938433	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2196	0.13618097931239767	No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC	2186	0.13556084734831572	No Hit
GCCTTGGGCTGACCTAGGACGGTCAGTTTGGTCCCTCCGCCGAACACCAG	2169	0.13450662300937638	No Hit
CTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAATGACGTT	2109	0.13078583122488466	No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT	1966	0.12191794413851267	No Hit
CCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCA	1863	0.11553058490846853	No Hit
TTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGGCG	1841	0.11416629458748823	No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGA	1815	0.11255395148087513	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1804	0.11187180632038499	No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT	1679	0.10412015676936053	No Hit
CTCCTGCACTGGAACCAGCAATGACGTTGGTGGTTATAACTATGTCTCCT	1679	0.10412015676936053	No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA	1665	0.10325197201964578	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	1644	0.10194969489507368	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	2885	73.62153	1
GGTATCA	1330	67.12723	1
TCAACGC	3545	58.299076	4
ATCAACG	3560	58.053436	3
TATCAAC	3765	55.65754	2
CAACGCA	3840	53.632843	5
AACGCAG	4030	50.925564	6
CGCAGAG	4555	44.738415	8
ACGCAGA	5030	40.513615	7
GCAGAGT	5740	35.74438	9
CAGCCGT	2375	29.705526	9
GTACATG	4220	29.516325	1
GTAATAC	2450	29.093622	1
TACATGG	4390	27.885626	2
ACATGGG	4340	27.543198	3
AATACAC	2670	27.239939	3
CAGAGTA	4990	26.4013	9
CTGTGCG	2450	26.151627	9
GTACACG	985	24.856426	5
TACACGG	995	24.606613	6