EGAF00005281120 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281120
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2956777
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	5354	0.18107554272777418	No Hit
GTCTAAGGGTTTGGAGTGGTTCACAGTCGTCGGATACTACTTTGACTTCT	5251	0.17759201995957086	No Hit
CCCTTAGACCGCGCACAGTAATAGACACCCGAGTCTTCAGCTCTCAGGCT	4538	0.15347792545734765	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	3609	0.12205857932471742	No Hit
GTAATAGACACCCGAGTCTTCAGCTCTCAGGCTGCTCATTTGAAAATAGA	3507	0.11860887716591409	No Hit
GTCTATTACTGTGCGCGGTCTAAGGGTTTGGAGTGGTTCACAGTCGTCGG	3274	0.11072867517570653	No Hit
GTATATTGCTGACAGTAATAAACTGCAGAATCCTCAGACTGCAGGCTGCT	3056	0.10335578232649942	No Hit
GCAATATACTCACTGGCCTCCGTACACTTTTGGCCAGGGGACCAAGGTGC	2997	0.1013603663718975	No Hit
GTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTC	2985	0.10095451905909711	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	4430	74.28354	1
TCAACGC	5070	64.7634	4
ATCAACG	5245	62.739845	3
CAACGCA	5725	57.35379	5
TATCAAC	5975	54.833534	2
GGTATCA	2120	54.005917	1
AACGCAG	6170	53.21725	6
CGCAGAG	6990	46.665268	8
ACGCAGA	7635	42.911636	7
GCAGAGT	8060	40.462723	9
TAGACCG	2230	37.779285	5
CCGCGCA	2345	34.69186	9
GTACATG	7805	33.305378	1
ACCGCGC	2525	32.22477	8
TACATGG	8115	31.677612	2
TTAGACC	2730	31.123764	4
ACATGGG	8150	30.393	3
CTTAGAC	2955	29.484964	3
CCCTTAG	3040	29.134773	1
AGACCGC	2890	28.902332	6