EGAF00005281132 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281132
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	939916
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTATAGTTCCCCTCAGACTTTTGGGCAGGGGACCAAGCTGGAGATCA	2192	0.23321232961243343	No Hit
GTAATATACAGCCGTGTCTTCAGATGTCAGGCTGCTCACCTCCAAAGAGA	2004	0.21321054221866637	No Hit
CTATAATACTGTTGACAGTAATAAGTTGCAAAATCTTCAGGCTGCAGGGT	1918	0.20406078841087924	No Hit
GTATATTACTGTACGAGAGAGCGTCCATTGCGGGGGTTCGACCCCTGGGG	1734	0.1844845709616604	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	1505	0.16012069163627388	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1309	0.13926776435341032	No Hit
GCCTATACGATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTGGAGTG	1238	0.13171389783767912	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1228	0.13064997297630854	No Hit
ATATACAGCCGTGTCTTCAGATGTCAGGCTGCTCACCTCCAAAGAGACTG	1108	0.11788287463986144	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	1003	0.10671166359547024	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	998	0.10617970116478494	No Hit
GCTGTATATTACTGTACGAGAGAGCGTCCATTGCGGGGGTTCGACCCCTG	954	0.10149843177475433	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1560	42.940388	1
TCAACGC	1590	39.85664	4
ATCAACG	1630	39.320366	3
CAACGCA	1655	38.291275	5
AACGCAG	1730	36.619556	6
GTACACG	605	34.518967	5
TATCAAC	1850	34.25699	2
CGCAGAG	1860	34.060123	8
TACACGG	625	33.403694	6
GTACATG	2735	30.549795	1
ACACGGG	690	30.256968	7
TAATACT	1285	29.141733	4
GTATTAT	1680	28.725868	1
ATAATAC	1240	28.45703	3
TACATGG	2795	28.343218	2
GTATGTA	915	28.339294	1
ATAGTTC	1645	28.008545	6
CAGCCGT	1290	27.90338	9
ACGCAGA	2310	27.736683	7
CTATAAT	1195	27.123903	1