FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1979846
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30130.15218355367033598No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT29230.14763774556202858No Hit
TCCTAAGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC28780.14536484150787485No Hit
TTATAAGACTGACAGTAGTAGTCAGCCTCGTCCTCAGTCTTCAGTCCAGA27410.13844511138745133No Hit
GACTTAGGACGGTCAACTTAGTCCCTCCGCCGAACACTCGATAATAGTCG25400.12829280661223144No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA23690.11965577120644738No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA21850.11036211907390776No Hit
GTCTTATAATGGCGACTATTATCGAGTGTTCGGCGGAGGGACTAAGTTGA21210.10712954441911139No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC20810.10510918525986365No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT20510.10359391589042785No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)