FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281183

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281183
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1105444
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAAACAGCCGTGTCCTCGCCTCTCAGGCCGTTCATTTGAAGATACA32020.2896573684420016No Hit
GTTTATTACTGTGCGAGAGGCCCTAGGGGATCGCTCTACGGTATGGACGT19830.17938493492207655No Hit
GTATGGAACCATATTGCTGACAGTAATACACTGCAAAATCTTCAGGCTCC17810.16111173428957054No Hit
GTTCCATACCGTACAGTTTTGGCCAGGGGACCCACCTGGAGATCAAACGA16990.1536939003694443No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT15230.1377726958579539No Hit
GTATTACTGTCAGCAATATGGTTCCATACCGTACAGTTTTGGCCAGGGGA14300.12935978665585957No Hit
ATGTATAACCACCGGTGAAAAGAATTGAGACCCACTCCAGTTCCTTCCCT11780.10656351655986192No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)