EGAF00005281232 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281232
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1057056
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATACACAGCCGTGTCTTCGGCGGTCACAGAGCTCAGCTTCAGGGAGA	3903	0.36923303968758514	No Hit
GTGTATTACTGTGCGACCCATCCGCGAAGTGGTTCGGGGAATTACTATGA	3086	0.2919429055792692	No Hit
GTCTCTGGCGGCTCCATCAGCAGTCGTAGTCACTACTGGGGGTGGTTCCG	1707	0.1614862410316956	No Hit
GTATTACTGTGCGACCCATCCGCGAAGTGGTTCGGGGAATTACTATGATT	1644	0.15552629188992825	No Hit
TCTCTACACAGTGAAACTTTTTTTAAAAAGAATAGTAAAGAAAATGCGGA	1600	0.1513637877274241	No Hit
CAGTAATACACAGCCGTGTCTTCGGCGGTCACAGAGCTCAGCTTCAGGGA	1343	0.1270509793237066	No Hit
GTGTGACCTGGAGCGAAAGCGGACAGGGCGTGACCGCCAGAAACTTCCCA	1110	0.10500862773590047	No Hit
CCTTTTATAGTGAGACCAGCAATTACAACCCGTCCCTCCAGAGTCGAGTC	1070	0.10122453304271486	No Hit
GTGTACAGGTCCCCGGAGGCATCCTGGCTGGGTGGGAAGTTTCTGGCGGT	1060	0.10027850936941846	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCAACG	1150	0.0	58.290493	3
TCAACGC	1190	0.0	56.328476	4
CAACGCA	1365	0.0	49.64668	5
AACGCAG	1455	0.0	47.031086	6
GTATCAA	1525	0.0	44.91911	1
TATCAAC	1510	0.0	44.875027	2
CGCAGAG	1590	0.0	43.03992	8
ACGCAGA	1585	0.0	42.72121	7
TATACCG	85	5.521937E-5	42.40783	5
GACCGTT	80	0.0021019771	36.01762	7
GGTATCA	605	0.0	35.75553	1
GAATACG	435	0.0	34.77563	9
CAGCCGT	1940	0.0	34.16104	9
GTAATAC	2110	0.0	31.781755	1
GCAGAGT	2135	0.0	31.715748	9
ACAGCCG	2195	0.0	30.8488	8
GTACATG	2325	0.0	29.152935	1
GTGCTAG	650	0.0	28.842796	1
TACCGTT	100	0.0062684817	28.814095	7
TACATGG	2395	0.0	27.69084	2