FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences970893
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAGACGGCCGTGTCGTCAGATCTCAGGTTCCTCAGCTCCATGTAGG42360.4362993656355541No Hit
GTCTATTACTGTGCGATAAGCTCTGAGGTGACGATTTTTCAAGTGGGCCG20820.21444175619764486No Hit
GTCTGGAACTGTGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCA17470.17993743903808143No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC12410.12782047043289013No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT12230.12596650712282403No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA12170.125348519352802No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11440.11782966815086729No Hit
GCCTACATGGAGCTGAGGAACCTGAGATCTGACGACACGGCCGTCTATTA10900.11226777822066901No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA10720.11041381491060291No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC10200.10505792090374531No Hit
GGATGGAACAGCGCTTACAATGGTGACACAAACTATGCACAGAAGTTCCA10060.10361594944036058No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)