EGAF00005281234 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281234
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	970893
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATAGACGGCCGTGTCGTCAGATCTCAGGTTCCTCAGCTCCATGTAGG	4040	0.4161117651481677	No Hit
GTCTATTACTGTGCGATAAGCTCTGAGGTGACGATTTTTCAAGTGGGCCG	2142	0.22062163389786515	No Hit
GTCTGGAACTGTGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCA	1757	0.18096741865478483	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	1380	0.1421371871050672	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	1274	0.1312194031680113	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	1189	0.12246457642603253	No Hit
GCCTACATGGAGCTGAGGAACCTGAGATCTGACGACACGGCCGTCTATTA	1081	0.11134079656563596	No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA	1038	0.1069118842138114	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC	1028	0.10588190459710801	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCAACGC	1210	0.0	55.961678	4
ATCAACG	1225	0.0	55.276436	3
GTATCAA	1330	0.0	52.545506	1
CAACGCA	1320	0.0	51.290276	5
AACGCAG	1360	0.0	50.295773	6
TATCAAC	1440	0.0	49.527153	2
ATAGACG	1295	0.0	47.282173	4
GACGGCC	1350	0.0	44.268124	7
AGACGGC	1375	0.0	43.46325	6
CGCAGAG	1610	0.0	42.48149	8
AATAGAC	1525	0.0	39.678726	3
GTAATAG	1600	0.0	39.175514	1
TAATAGA	1595	0.0	37.939297	2
TAGACCG	80	0.0021034114	36.01232	5
GTACACG	675	0.0	33.077984	5
ACGCAGA	2110	0.0	32.418125	7
GTACATG	2335	0.0	32.089424	1
GAATACG	255	9.640644E-11	31.055046	9
TAGACGG	2070	0.0	29.575336	5
TACACGG	760	0.0	29.369385	6