EGAF00005281241 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281241
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	840708
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATAATACACAGCCGTGTCGTCGGCTCTCAGACTGTTCATTTGCAGATACA	1570	0.18674736055800586	No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA	952	0.11323788996893094	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	949	0.11288104787869273	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	931	0.11073999533726335	No Hit
GTGTATTATTGTGCGAAAGGGACCTCTGGTTCAGGGAGTTACTTCGACCA	928	0.11038315324702512	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	919	0.10931262697631045	No Hit
ATTATAGGTATTACACTTTTGGCCAGGGGACCAAGCTGGAGATCAAACGA	913	0.10859894279583399	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC	913	0.10859894279583399	No Hit
TTTAAGAGGTGTCCAGTGTCAGGTCCAACTGAAGGAGTCTGGGGGAGGCG	851	0.10122420626424394	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCAACG	2235	0.0	40.90868	3
TCAACGC	2250	0.0	40.635956	4
CAACGCA	2310	0.0	39.580475	5
AACGCAG	2430	0.0	37.625885	6
TATCAAC	2580	0.0	35.74714	2
CGCAGAG	2625	0.0	34.83082	8
GTATCAA	2805	0.0	34.227245	1
ACGCAGA	2785	0.0	32.829765	7
TAAGCGT	95	0.00489198	30.312769	5
GCAGAGT	3080	0.0	29.9191	9
ACGTAGG	105	0.007872723	27.499441	1
TAGGTAT	865	0.0	27.465475	5
ATAGGTA	835	0.0	26.727877	4
TTATAGG	910	0.0	25.337257	2
TACACGG	490	0.0	24.977106	6
TATAGGT	810	0.0	24.88641	3
GTACACG	500	0.0	24.477562	5
GTATTAC	880	0.0	23.72491	8
GGTATTA	880	0.0	23.72491	7
GTACATG	2360	0.0	23.552221	1