FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences725249
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT14630.20172382174949566No Hit
GTATGATGATCTCCCAATAACTTTTGGCGGAGGGACCAAGGTGGAGATGA11260.15525702207104042No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC10200.14064135214250556No Hit
GGTGTACACCCTGCCCCCATCCCAGGAGGAGATGACCAAGAACCAGGTCA9260.12768028635682366No Hit
TCATCATACTGTTGACAGTAGTATGTTGCAATATCTTCAGGCTGCAGACT8720.12023456771398512No Hit
GTGTACACCTGTGGCTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT8580.11830419621398995No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7860.10837657135687191No Hit
ACTGTCAACAGTATGATGATCTCCCAATAACTTTTGGCGGAGGGACCAAG7820.10782503664258758No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT7730.10658408353544782No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC7260.10010355064260688No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)